not sure if you can do anything about it, but please read my post here:
Follow this link to find my solution for this problem!
Of course you can't change windows, but maybe you can do something else? Maybe making sure, that the folder is not corrupted, so it can be deleted after giving the rights to the user. So you would avoid the need to boot in save mode.
Steps to Reproduce
windows 10 is blocking all things in program files. Try to update/delete a mod. Instead you will have a undeletable folder with 0Byte in your mods folder.
Status: Known Issue
We are aware of this issue and have it logged internally but either we do not have a fix ready yet or we are not planning on addressing the issue in the immediate future.